Thank you to those of you who joined us for our GenomeSpace orientation webinar on October 24, 2016. If you missed the webinar, don't worry! A recording of the webinar is available on our YouTube channel. While you're there, check out our recipe videos and other helpful guides.
For future reference, links to webinar recordings will be made available in the webinar event descriptions on the GenomeSpace calendar.
Find out more about GenomeSpace at the Intelligent Systems for Molecular Biology (ISMB) conference in Orlando. July 10-12, 2016 and its satellite conference 17th Annual Bioinformatics Open Source Conference (BOSC) on July 8th and 9th. The GenomeSpace team will be presenting a Technology Track talk and a poster.
ISMB Talk: Tuesday July 12, from 11:40-12:00 EDT.
BOSC Talk: Friday July 8, from 10:45-11:03 EDT.
ISMB Poster: Monday July 11, from 17:40-19:30 EDT. Poster #E06.
BOSC Poster: Friday July 8 and Saturday July 9, from 13:00-14:00 EDT. Poster #1.
We have rescheduled our recipe webinar to June 27, 2016 from 2:00-3:00PM EST (18:00-19:00 UTC/GMT). We will cover how to Find differentially expressed genes in RNA-Seq data using GenomeSpace, the UCSC Genome Browser, GenePattern, and IGV. Click here to sign up now! Check out the GenomeSpace Calendar of Events for upcoming webinar, office hours, and other outreach events.
The GenomeSpace paper appeared online in Nature Methods on January 18, 2016. The paper is available to view at Nature Methods.
We welcome contributions to our recipe collection. To contribute a recipe, or if you have suggestions for new recipes, please contact us at gs-recipes@broadinstitute.
See how you can use GenomeSpace to carry out a rich, multi-data type, multi-tool computational analysis without programming at "Gene Networks in Cancer”. This tutorial describes the end-to-end workflow for GenomeSpace’s driving biological project, which identifies and visualizes gene regulatory networks in human cancer stem cells as previously published in Wong et al. 2008, and Ben-Porath et al. 2008.
Find out more about GenomeSpace at the 2015 American Society of Human Genetics (ASHG) meeting in Baltimore, October 6 to 10. Look for us at an Interactive Invited Workshop (room 337) on Friday, October 9 at 7:15 AM, and contact us (firstname.lastname@example.org) if you want to meet to discuss how GenomeSpace can help you.
Find out more about GenomeSpace and GenePattern at the Center for Cell Circuits Computational Genomics Workshop, September 30 & October 1, 2015 at the Broad Institute. Look for us on day 2, Thursday October 1 for hands-on training.
Find out more about GenomeSpace at the 2015 Annual Americal Association for Cancer Research meeting in Philadelphia, April 18-22. Look for us in Poster Section 5 on Wednesday, April 22, 2015, from 8:00 AM to 12:00 PM, and contact us if you want to meet to discuss how you can use GenomeSpace can help you.
Find out more about GenomeSpace and GenePattern at the at the Center for Cell Circuits Computational Genomics Workshop, September 22 & 23, 2014 at the Broad Institute. Look for us on day 2, Tuesday September 23rd for hands-on training.